Skip to content
GitLab
Menu
Projects
Groups
Snippets
Help
Help
Support
Community forum
Keyboard shortcuts
?
Submit feedback
Contribute to GitLab
Sign in
Toggle navigation
Menu
Open sidebar
Lucia Trastulla
CASTom-iGEx
Commits
35af6ebc
Commit
35af6ebc
authored
May 27, 2022
by
Lucia Trastulla
Browse files
correct rep
parent
f49e1eb7
Changes
1
Hide whitespace changes
Inline
Side-by-side
Software/model_prediction/PriLer_predictGeneExp_smallerVariantSet_run.R
View file @
35af6ebc
...
...
@@ -15,7 +15,6 @@ parser$add_argument("--InfoFold", type = "character", help = "path to fold with
parser
$
add_argument
(
"--cis_thres"
,
type
=
"integer"
,
default
=
200000
,
help
=
"window (in bp) to compute distance from gene and snps [default %(default)s]"
)
parser
$
add_argument
(
"--no_zip"
,
type
=
"logical"
,
default
=
F
,
help
=
"if true final results not zipped [default %(default)s]"
)
parser
$
add_argument
(
"--outFold"
,
type
=
"character"
,
help
=
"Output file [basename only]"
)
parser
$
add_argument
(
"--outFold"
,
type
=
"character"
,
help
=
"Output file [basename only]"
)
parser
$
add_argument
(
"--genoInfo_model_file"
,
type
=
"character"
,
help
=
"directory with genotype info data to use for the prediction"
)
parser
$
add_argument
(
"--genoInfo_file"
,
type
=
"character"
,
help
=
"directory with genotype info data from the model, MUST match the trained model"
)
...
...
Write
Preview
Supports
Markdown
0%
Try again
or
attach a new file
.
Attach a file
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Cancel
Please
register
or
sign in
to comment